Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY28075.1Phage major tail protein, phi13 family. (190 aa)    
Predicted Functional Partners:
EKY28076.1
Hypothetical protein.
 
    0.976
EKY28078.1
Putative phage head-tail adaptor.
 
    0.957
EKY28077.1
Phage protein, HK97 gp10 family.
  
    0.878
EKY28068.1
Phage tail component protein.
 
    0.877
EKY28080.1
Phage major capsid protein, HK97 family.
 
    0.877
EKY28082.1
Phage portal protein, HK97 family.
 
   
 0.863
EKY28079.1
Phage DNA packaging protein.
 
    0.855
EKY28086.1
Phage terminase, small subunit, P27 family.
 
     0.851
EKY28067.1
Phage minor structural protein.
 
    0.847
EKY28081.1
Endopeptidase Clp; Belongs to the peptidase S14 family.
 
     0.836
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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