Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY28077.1Phage protein, HK97 gp10 family. (133 aa)    
Predicted Functional Partners:
EKY28076.1
Hypothetical protein.
  
    0.965
EKY28075.1
Phage major tail protein, phi13 family.
  
    0.878
EKY28078.1
Putative phage head-tail adaptor.
  
    0.829
EKY28079.1
Phage DNA packaging protein.
       0.825
EKY28080.1
Phage major capsid protein, HK97 family.
  
    0.772
EKY28081.1
Endopeptidase Clp; Belongs to the peptidase S14 family.
       0.741
EKY28082.1
Phage portal protein, HK97 family.
     
 0.719
EKY28071.1
Hypothetical protein.
  
    0.575
EKY28083.1
Hypothetical protein.
       0.491
EKY28084.1
Hypothetical protein.
       0.491
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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