Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY28079.1Phage DNA packaging protein. (91 aa)    
Predicted Functional Partners:
EKY28078.1
Putative phage head-tail adaptor.
 
 
 0.975
EKY28082.1
Phage portal protein, HK97 family.
 
 
 0.965
EKY28080.1
Phage major capsid protein, HK97 family.
 
 
 0.962
EKY28081.1
Endopeptidase Clp; Belongs to the peptidase S14 family.
 
    0.926
EKY26560.1
Phage portal protein.
 
 
 0.888
EKY28075.1
Phage major tail protein, phi13 family.
 
    0.855
EKY28076.1
Hypothetical protein.
 
     0.847
EKY28085.1
Putative phage terminase, large subunit.
 
     0.847
EKY28077.1
Phage protein, HK97 gp10 family.
       0.825
EKY28097.1
VRR-NUC domain protein; KEGG: bra:BRADO4398 0.0028 DNA-directed DNA polymerase; K02342 DNA polymerase III subunit epsilon; Psort location: Cytoplasmic, score: 7.50.
 
     0.769
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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