Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY28083.1Hypothetical protein. (62 aa)    
Predicted Functional Partners:
EKY28084.1
Hypothetical protein.
       0.773
EKY28085.1
Putative phage terminase, large subunit.
       0.566
EKY28086.1
Phage terminase, small subunit, P27 family.
       0.566
EKY28081.1
Endopeptidase Clp; Belongs to the peptidase S14 family.
       0.551
EKY28082.1
Phage portal protein, HK97 family.
       0.551
EKY28080.1
Phage major capsid protein, HK97 family.
       0.527
EKY28075.1
Phage major tail protein, phi13 family.
       0.491
EKY28076.1
Hypothetical protein.
       0.491
EKY28077.1
Phage protein, HK97 gp10 family.
       0.491
EKY28078.1
Putative phage head-tail adaptor.
       0.491
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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