Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY28086.1Phage terminase, small subunit, P27 family. (161 aa)    
Predicted Functional Partners:
EKY28085.1
Putative phage terminase, large subunit.
 
    0.937
EKY28091.1
HNH endonuclease domain protein.
 
    0.876
EKY28078.1
Putative phage head-tail adaptor.
 
   
 0.869
EKY28075.1
Phage major tail protein, phi13 family.
 
     0.851
EKY28076.1
Hypothetical protein.
 
     0.846
EKY28082.1
Phage portal protein, HK97 family.
 
  
 0.827
EKY28090.1
Hypothetical protein.
 
     0.826
EKY28088.1
Hypothetical protein.
 
     0.798
EKY28069.1
Phage tail tape measure protein, TP901 family.
 
     0.782
EKY28067.1
Phage minor structural protein.
 
  
 0.746
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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