STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY28090.1Hypothetical protein. (151 aa)    
Predicted Functional Partners:
EKY28089.1
DNA (cytosine-5-)-methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.943
EKY28091.1
HNH endonuclease domain protein.
 
    0.838
EKY28086.1
Phage terminase, small subunit, P27 family.
 
     0.826
EKY28085.1
Putative phage terminase, large subunit.
 
     0.812
EKY28088.1
Hypothetical protein.
 
     0.767
EKY28075.1
Phage major tail protein, phi13 family.
 
     0.749
EKY28082.1
Phage portal protein, HK97 family.
 
     0.745
EKY28079.1
Phage DNA packaging protein.
 
    0.729
EKY28078.1
Putative phage head-tail adaptor.
 
     0.715
EKY28080.1
Phage major capsid protein, HK97 family.
 
    0.702
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.