STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY28105.1HTH domain protein; Psort location: Cytoplasmic, score: 7.50. (115 aa)    
Predicted Functional Partners:
EKY28102.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
     
 0.779
EKY28101.1
Hypothetical protein.
       0.771
EKY28103.1
Hypothetical protein; KEGG: edi:EDI_076680 0.00086 rnf5 K10666; Psort location: Cytoplasmic, score: 7.50.
  
    0.762
EKY28100.1
KEGG: ccb:Clocel_0761 7.0e-279 DNA-directed DNA polymerase; K02334 DNA polymerase bacteriophage-type; Psort location: Cytoplasmic, score: 7.50.
       0.743
EKY28104.1
Hypothetical protein.
       0.740
EKY28098.1
Virulence-associated protein E; Psort location: Cytoplasmic, score: 7.50.
       0.724
EKY28099.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.715
EKY28086.1
Phage terminase, small subunit, P27 family.
 
     0.710
EKY28107.1
Putative toxin-antitoxin system, toxin component; Psort location: Cytoplasmic, score: 7.50.
 
     0.682
EKY28090.1
Hypothetical protein.
 
     0.657
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.