STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY28108.1DNA-binding helix-turn-helix protein; KEGG: apb:SAR116_1631 0.0014 transcriptional regulator, XRE family; Psort location: Cytoplasmic, score: 7.50. (125 aa)    
Predicted Functional Partners:
EKY28107.1
Putative toxin-antitoxin system, toxin component; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.943
EKY23482.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 5.1e-10 TPR repeat-containing serine/threonin protein kinase K00908; Psort location: Cytoplasmic, score: 7.50.
     
 0.800
EKY27130.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 8.1e-24 fadD; long-chain-fatty-acid--CoA ligase K03743; Belongs to the CinA family.
    
 0.796
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.750
EKY28086.1
Phage terminase, small subunit, P27 family.
 
    0.585
EKY28091.1
HNH endonuclease domain protein.
 
     0.564
EKY28075.1
Phage major tail protein, phi13 family.
 
     0.559
EKY28090.1
Hypothetical protein.
 
     0.535
EKY28067.1
Phage minor structural protein.
 
     0.518
EKY28068.1
Phage tail component protein.
 
     0.508
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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