STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY28134.1Polysaccharide deacetylase; KEGG: bha:BH1917 2.3e-28 notB; chitooligosaccharide deacetylase K01463; Psort location: Extracellular, score: 9.60. (227 aa)    
Predicted Functional Partners:
mprF
Hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
 
    0.851
EKY28136.1
Monogalactosyldiacylglycerol synthase protein; KEGG: cbl:CLK_3302 4.1e-29 hypothetical protein; K03429 1,2-diacylglycerol 3-glucosyltransferase.
 
     0.840
EKY28135.1
Hypothetical protein; KEGG: ddf:DEFDS_0730 1.0e-15 monogalactosyldiacylglycerol synthase.
 
     0.838
EKY28362.1
KEGG: bmq:BMQ_0937 9.1e-80 glycosyl transferase domain protein, group 2 family protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.821
EKY23482.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 5.1e-10 TPR repeat-containing serine/threonin protein kinase K00908; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.555
EKY29063.1
KEGG: saf:SULAZ_0172 1.9e-24 glycosyl transferase, group 2 family; Psort location: CytoplasmicMembrane, score: 8.16.
  
 
 0.496
EKY28364.1
Hypothetical protein.
  
 
 0.496
EKY28132.1
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
       0.455
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
     
 0.421
EKY28695.1
Hypothetical protein; KEGG: ctc:CTC00537 1.1e-14 peptidoglycan N-acetylglucosamine deacetylase K01463; Psort location: Cytoplasmic, score: 7.50.
  
     0.407
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.