Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY28162.1Transcriptional regulator domain protein. (132 aa)    
Predicted Functional Partners:
EKY28161.1
Sugar-binding domain protein.
     0.987
EKY28160.1
Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.672
EKY27637.1
Hypothetical protein.
  
     0.581
EKY27254.1
KEGG: bca:BCE_0044 5.9e-60 purR; pur operon repressor K09685; Psort location: Cytoplasmic, score: 9.95.
  
   
 0.499
EKY28163.1
EDD domain protein, DegV family.
       0.426
EKY22721.1
Putative transcriptional repressor CcpN; KEGG: lsg:lse_1845 1.0e-41 CBS domain protein; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.421
EKY28164.1
RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
       0.401
EKY27171.1
Aluminum resistance protein; KEGG: ava:Ava_4213 2.3e-97 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme K01758; Psort location: Cytoplasmic, score: 7.50.
  
     0.400
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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