Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY28195.1Hypothetical protein. (289 aa)    
Predicted Functional Partners:
EKY28196.1
Hypothetical protein.
       0.825
EKY22770.1
Stage V sporulation protein AC; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.660
EKY22769.1
KEGG: bao:BAMF_1841 2.1e-71 spoVAD1; stage V sporulation protein AD.
 
  
 0.656
EKY22768.1
Stage V sporulation protein AE; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.655
EKY28194.1
Phosphoribulokinase/uridine kinase family protein.
       0.625
EKY26645.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
     0.625
EKY27048.1
Sporulation protein YtfJ.
  
     0.608
EKY24424.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.35.
 
   
 0.582
EKY26661.1
RNA polymerase sigma-E factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
     0.556
EKY22752.1
Stage II sporulation protein P.
  
     0.546
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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