EKY27963.1 protein (Clostridium celatum) - STRING interaction network

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EKY27963.1

ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_853 6.1e-177 ABC transporter ATPase component; Psort location: Cytoplasmic, score: 9.97. (529 aa)

Predicted Functional Partners:

rpsB

0.780

rplU

0.775

rplD

0.770

rpsC

0.769

rplS

0.769

rpsO

0.766

rpmD

0.765

rplC

0.763

rplT

0.762

rpmH

0.762

Your Current Organism:

Clostridium celatum

NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EKY27963.1	rplC	HMPREF0216_01074	HMPREF0216_01151	ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_853 6.1e-177 ABC transporter ATPase component; Psort location: Cytoplasmic, score: 9.97.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.763
EKY27963.1	rplD	HMPREF0216_01074	HMPREF0216_01152	ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_853 6.1e-177 ABC transporter ATPase component; Psort location: Cytoplasmic, score: 9.97.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.770
EKY27963.1	rplS	HMPREF0216_01074	HMPREF0216_01783	ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_853 6.1e-177 ABC transporter ATPase component; Psort location: Cytoplasmic, score: 9.97.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.769
EKY27963.1	rplT	HMPREF0216_01074	HMPREF0216_00844	ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_853 6.1e-177 ABC transporter ATPase component; Psort location: Cytoplasmic, score: 9.97.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.762
EKY27963.1	rplU	HMPREF0216_01074	HMPREF0216_03306	ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_853 6.1e-177 ABC transporter ATPase component; Psort location: Cytoplasmic, score: 9.97.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.775
EKY27963.1	rpmD	HMPREF0216_01074	HMPREF0216_01169	ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_853 6.1e-177 ABC transporter ATPase component; Psort location: Cytoplasmic, score: 9.97.	Ribosomal protein L30; KEGG: apb:SAR116_2409 1.6e-09 ribosomal protein L30 K02907; Psort location: Cytoplasmic, score: 9.67.	0.765
EKY27963.1	rpmH	HMPREF0216_01074	HMPREF0216_01467	ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_853 6.1e-177 ABC transporter ATPase component; Psort location: Cytoplasmic, score: 9.97.	Ribosomal protein L34; KEGG: rak:A1C_04775 3.1e-08 rpmH; 50S ribosomal protein L34 K02914; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bL34 family.	0.762
EKY27963.1	rpsB	HMPREF0216_01074	HMPREF0216_01722	ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_853 6.1e-177 ABC transporter ATPase component; Psort location: Cytoplasmic, score: 9.97.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.780
EKY27963.1	rpsC	HMPREF0216_01074	HMPREF0216_01157	ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_853 6.1e-177 ABC transporter ATPase component; Psort location: Cytoplasmic, score: 9.97.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.769
EKY27963.1	rpsO	HMPREF0216_01074	HMPREF0216_03446	ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_853 6.1e-177 ABC transporter ATPase component; Psort location: Cytoplasmic, score: 9.97.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.766
rplC	EKY27963.1	HMPREF0216_01151	HMPREF0216_01074	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_853 6.1e-177 ABC transporter ATPase component; Psort location: Cytoplasmic, score: 9.97.	0.763
rplC	rplD	HMPREF0216_01151	HMPREF0216_01152	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.999
rplC	rplS	HMPREF0216_01151	HMPREF0216_01783	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.992
rplC	rplT	HMPREF0216_01151	HMPREF0216_00844	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.993
rplC	rplU	HMPREF0216_01151	HMPREF0216_03306	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.993
rplC	rpmD	HMPREF0216_01151	HMPREF0216_01169	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L30; KEGG: apb:SAR116_2409 1.6e-09 ribosomal protein L30 K02907; Psort location: Cytoplasmic, score: 9.67.	0.998
rplC	rpmH	HMPREF0216_01151	HMPREF0216_01467	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L34; KEGG: rak:A1C_04775 3.1e-08 rpmH; 50S ribosomal protein L34 K02914; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bL34 family.	0.939
rplC	rpsB	HMPREF0216_01151	HMPREF0216_01722	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.994
rplC	rpsC	HMPREF0216_01151	HMPREF0216_01157	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.998
rplC	rpsO	HMPREF0216_01151	HMPREF0216_03446	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.990