Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EKY27924.1KEGG: cbe:Cbei_0070 3.6e-282 aconitate hydratase K01681; Psort location: Cytoplasmic, score: 9.97. (640 aa)    
Predicted Functional Partners:
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
 0.968
EKY26142.1
Isocitrate dehydrogenase, NADP-dependent; KEGG: cbe:Cbei_4199 3.5e-181 isocitrate dehydrogenase K00031; Psort location: Cytoplasmic, score: 9.97; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.964
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
   
 0.925
EKY28591.1
KEGG: cbk:CLL_A0373 5.1e-109 crt; 3-hydroxybutyryl-CoA dehydratase K01715; Psort location: Cytoplasmic, score: 7.50; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.863
groL
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
   
 0.841
EKY27657.1
KEGG: cbe:Cbei_0411 9.3e-181 acetyl-CoA acetyltransferase K00626; Psort location: Cytoplasmic, score: 9.97; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.837
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
  
 0.837
ldh-2
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
  
 0.837
EKY27925.1
Homocitrate synthase; KEGG: cbe:Cbei_0069 1.5e-166 aksA; trans-homoaconitate synthase; K01655 homocitrate synthase K02594; Psort location: Cytoplasmic, score: 7.50; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 0.829
rpmF
Ribosomal protein L32; Psort location: Cytoplasmic, score: 9.67; Belongs to the bacterial ribosomal protein bL32 family.
   
 0.823
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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