STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY27881.1Putative rRNA large subunit m3Psi methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. (138 aa)    
Predicted Functional Partners:
EKY27882.1
Hypothetical protein.
 
     0.876
EKY27880.1
Hypothetical protein; Psort location: Cellwall, score: 8.75; Belongs to the small heat shock protein (HSP20) family.
       0.753
EKY26620.1
KEGG: cbt:CLH_1180 5.3e-75 rsmD; RNA methyltransferase, RsmD family; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.564
EKY27879.1
Hypothetical protein; KEGG: ddd:Dda3937_02235 5.0e-05 secA, azi, pea, prlD; preprotein translocase subunit, ATPase K03070; Psort location: Cytoplasmic, score: 7.50.
       0.520
rsmI
S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
 
   
 0.514
EKY27877.1
Metallo-beta-lactamase domain protein; KEGG: lsg:lse_0274 2.1e-48 metallo-beta-lactamase superfamily; Psort location: Cytoplasmic, score: 7.50.
 
     0.454
EKY26632.1
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
 
   
 0.452
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
 
  
 0.443
EKY27884.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: sph:MGAS10270_Spy1790 1.6e-64 ihk; two-component system histidine kinase K10819; Psort location: Cytoplasmic, score: 7.94.
       0.420
EKY27883.1
KEGG: bde:BDP_0386 6.1e-35 vicR; response regulator protein VicR K07776; Psort location: Cytoplasmic, score: 9.97.
       0.413
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.