Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY27885.1Efflux ABC transporter, permease protein; KEGG: apj:APJL_0621 0.00032 putative ABC transporter ATP-binding protein; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 9.36. (452 aa)    
Predicted Functional Partners:
EKY27886.1
ABC transporter, ATP-binding protein; KEGG: snc:HMPREF0837_10890 7.1e-64 ABC superfamily transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 9.96.
 
 0.984
EKY23559.1
KEGG: llk:LLKF_0891 7.7e-51 yijD; ABC transporter ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 9.51.
 
 0.881
EKY27884.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: sph:MGAS10270_Spy1790 1.6e-64 ihk; two-component system histidine kinase K10819; Psort location: Cytoplasmic, score: 7.94.
 
   
 0.856
EKY27446.1
Efflux transporter, RND family, MFP subunit; KEGG: edi:EDI_048910 0.00027 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.788
EKY24466.1
ABC transporter, ATP-binding protein; KEGG: lmh:LMHCC_1430 1.1e-83 macrolide export ATP-binding/permease protein MacB K02003; Psort location: CytoplasmicMembrane, score: 8.78.
 
 0.744
EKY27883.1
KEGG: bde:BDP_0386 6.1e-35 vicR; response regulator protein VicR K07776; Psort location: Cytoplasmic, score: 9.97.
 
     0.696
EKY28844.1
KEGG: lwe:lwe2133 4.6e-69 ABC transporter, ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 8.78.
  
 0.687
EKY28302.1
Putative bacteriocin export ABC transporter; KEGG: lwe:lwe2133 8.0e-72 ABC transporter, ATP-binding protein K02003; Psort location: CytoplasmicMembrane, score: 8.78.
  
 0.687
EKY22584.1
ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_1760 2.1e-206 ABC transporter ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.687
EKY22052.1
KEGG: sjj:SPJ_0724 2.4e-31 methionine import ATP-binding protein MetN K02003; Psort location: CytoplasmicMembrane, score: 9.96.
  
 0.687
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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