STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY27857.1Putative HTH-type transcriptional regulator IscR; KEGG: hdn:Hden_2359 1.1e-18 transcriptional regulator, Rrf2 family; Psort location: Cytoplasmic, score: 7.50. (149 aa)    
Predicted Functional Partners:
iscS
Cysteine desulfurase NifS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
 
 
 0.939
EKY27855.1
Fe-S iron-sulfur cluster assembly protein, NifU family; KEGG: rxy:Rxyl_1354 5.7e-21 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.909
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
  
  
 0.795
EKY29385.1
Putative cysteine desulfurase; KEGG: cbe:Cbei_1312 1.2e-125 aminotransferase, class V; K04487 cysteine desulfurase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.698
EKY29631.1
Cysteine desulfurase family protein; KEGG: clj:CLJU_c27730 1.2e-118 selenocysteine lyase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.614
EKY27858.1
ATPase, AAA family; KEGG: ava:Ava_B0112 3.3e-82 recombination factor protein RarA/unknown domain fusion protein K07478; Psort location: Cytoplasmic, score: 7.50.
       0.596
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
   0.456
EKY27408.1
Oxidoreductase NAD-binding domain protein.
     
 0.436
EKY27853.1
Hypothetical protein.
       0.414
EKY27525.1
Putative HTH-type transcriptional repressor NsrR; KEGG: apb:SAR116_0897 5.6e-16 transcriptional regulator, BadM/Rrf2 family K13771.
  
     0.414
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.