EKY27818.1 protein (Clostridium celatum) - STRING interaction network

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Your Current Organism:

Clostridium celatum

NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EKY27818.1	rplD	HMPREF0216_01175	HMPREF0216_01152	Putative methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	0.946
EKY27818.1	rplF	HMPREF0216_01175	HMPREF0216_01166	Putative methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	0.953
EKY27818.1	rplN	HMPREF0216_01175	HMPREF0216_01161	Putative methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.939
EKY27818.1	rplO	HMPREF0216_01175	HMPREF0216_01170	Putative methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.970
EKY27818.1	rplP	HMPREF0216_01175	HMPREF0216_01158	Putative methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.937
EKY27818.1	rplR	HMPREF0216_01175	HMPREF0216_01167	Putative methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.963
EKY27818.1	rplX	HMPREF0216_01175	HMPREF0216_01162	Putative methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.936
EKY27818.1	rpmD	HMPREF0216_01175	HMPREF0216_01169	Putative methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	Ribosomal protein L30; KEGG: apb:SAR116_2409 1.6e-09 ribosomal protein L30 K02907; Psort location: Cytoplasmic, score: 9.67.	0.962
EKY27818.1	rpsE	HMPREF0216_01175	HMPREF0216_01168	Putative methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.975
EKY27818.1	rpsH	HMPREF0216_01175	HMPREF0216_01165	Putative methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.947
rplD	EKY27818.1	HMPREF0216_01152	HMPREF0216_01175	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Putative methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val).	0.946
rplD	rplF	HMPREF0216_01152	HMPREF0216_01166	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	0.997
rplD	rplN	HMPREF0216_01152	HMPREF0216_01161	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.	0.998
rplD	rplO	HMPREF0216_01152	HMPREF0216_01170	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.997
rplD	rplP	HMPREF0216_01152	HMPREF0216_01158	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.999
rplD	rplR	HMPREF0216_01152	HMPREF0216_01167	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.998
rplD	rplX	HMPREF0216_01152	HMPREF0216_01162	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.998
rplD	rpmD	HMPREF0216_01152	HMPREF0216_01169	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Ribosomal protein L30; KEGG: apb:SAR116_2409 1.6e-09 ribosomal protein L30 K02907; Psort location: Cytoplasmic, score: 9.67.	0.997
rplD	rpsE	HMPREF0216_01152	HMPREF0216_01168	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.999
rplD	rpsH	HMPREF0216_01152	HMPREF0216_01165	50S ribosomal protein L4; Forms part of the polypeptide exit tunnel.	Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.999