STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY27836.1Hypothetical protein; KEGG: cbe:Cbei_0188 3.6e-37 N-acetylmuramoyl-L-alanine amidase CwlD; K01448 N-acetylmuramoyl-L-alanine amidase; Psort location: Cytoplasmic, score: 7.50. (125 aa)    
Predicted Functional Partners:
EKY27835.1
KEGG: cpe:CPE2367 8.4e-22 N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase.
     0.941
EKY28064.1
N-acetylmuramoyl-L-alanine amidase.
  
  0.876
EKY24616.1
KEGG: cdf:CD0784 3.4e-48 putative N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase; Psort location: Cytoplasmic, score: 7.50.
  
  
  0.837
EKY29409.1
KEGG: ctc:CTC01009 4.2e-31 putative N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase; Psort location: Cellwall, score: 8.75.
  
  
  0.811
EKY27834.1
Na/Pi-cotransporter II-like protein; KEGG: apb:SAR116_1202 1.1e-06 phosphate uptake regulator, PhoU K02039; Psort location: CytoplasmicMembrane, score: 9.55.
       0.737
EKY25748.1
Ser/Thr phosphatase family protein.
  
 
  0.709
EKY29582.1
KEGG: cby:CLM_3517 2.3e-34 N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase; Psort location: Cellwall, score: 8.75.
  
  
 
0.653
EKY26661.1
RNA polymerase sigma-E factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
     0.591
EKY22730.1
Sporulation protein YqfD; Psort location: Cytoplasmic, score: 7.50.
  
   
 0.585
EKY27238.1
Sporulation protein YabP; KEGG: cla:Cla_1078 0.0056 cation-transporting ATPase, P-type; K01533 Cu2+-exporting ATPase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.582
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.