Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY27620.1TldD/PmbA family protein; KEGG: reh:H16_A1124 1.1e-76 tldD; microcin-processing peptidase 2 K03568; Psort location: Cytoplasmic, score: 9.67. (459 aa)    
Predicted Functional Partners:
EKY27621.1
TldD/PmbA family protein; KEGG: apb:SAR116_1128 5.0e-40 predicted Zn-dependent protease K03592; Psort location: Cytoplasmic, score: 9.97.
 
    
0.859
EKY27622.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: ctc:CTC02435 2.8e-53 sarcosine oxidase alpha subunit K00302; Psort location: CytoplasmicMembrane, score: 8.78.
  
    0.748
EKY26443.1
KEGG: cbt:CLH_0670 9.2e-261 NADH oxidase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.475
EKY27618.1
Potassium transporter peripheral membrane component; KEGG: apb:SAR116_0219 3.9e-47 K+ transport systems, NAD-binding component K03499; Psort location: CytoplasmicMembrane, score: 8.78.
       0.467
EKY27619.1
Potassium uptake protein, TrkH family; KEGG: apb:SAR116_1886 2.0e-75 cation transporter K03498; Psort location: CytoplasmicMembrane, score: 10.00.
       0.467
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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