Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY27627.1Trypsin; KEGG: cbe:Cbei_0379 4.1e-100 2-alkenal reductase. (402 aa)    
Predicted Functional Partners:
EKY23482.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 5.1e-10 TPR repeat-containing serine/threonin protein kinase K00908; Psort location: Cytoplasmic, score: 7.50.
  
 0.968
EKY27248.1
Hypothetical protein; KEGG: ctc:CTC00192 2.9e-44 periplasmic trypsin-like serine protease; K01362; Psort location: Cytoplasmic, score: 7.50.
  
  
 
0.850
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
   
 0.697
rplT
Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
   0.679
EKY28591.1
KEGG: cbk:CLL_A0373 5.1e-109 crt; 3-hydroxybutyryl-CoA dehydratase K01715; Psort location: Cytoplasmic, score: 7.50; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.617
rplV
Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
  
 
 
 0.575
rpsF
Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
   
 
 0.574
rpsP
Ribosomal protein S16; KEGG: apb:SAR116_1817 3.0e-17 ribosomal protein S16 K02959; Psort location: Cytoplasmic, score: 9.97; Belongs to the bacterial ribosomal protein bS16 family.
 
   0.574
EKY27761.1
Peptidase, S41 family; KEGG: cbt:CLH_3101 4.6e-124 carboxyl-terminal protease K03797; Psort location: CytoplasmicMembrane, score: 8.78; Belongs to the peptidase S41A family.
 
 
 0.558
EKY27626.1
Hydrolase, alpha/beta domain protein; KEGG: bmd:BMD_2746 1.8e-07 alpha/beta fold family hydrolase; Psort location: Cytoplasmic, score: 7.50.
    
 0.558
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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