STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY27638.1LysM domain protein; KEGG: fps:FP0019 0.00013 mltD; membrane-bound lytic murein transglycosylase D precursor K08307; Psort location: Cytoplasmic, score: 7.50. (522 aa)    
Predicted Functional Partners:
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
 0.834
EKY28194.1
Phosphoribulokinase/uridine kinase family protein.
 
  
  0.801
EKY27130.1
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 8.1e-24 fadD; long-chain-fatty-acid--CoA ligase K03743; Belongs to the CinA family.
     
  0.777
EKY27934.1
Hypothetical protein; KEGG: ddi:DDB_G0283391 2.7e-05 kinX; LISK family protein kinase; K05743 LIM domain kinase 1; Psort location: Cytoplasmic, score: 7.50.
  
     0.764
EKY24638.1
Single-strand binding family protein.
  
     0.758
EKY23994.1
Hypothetical protein.
  
     0.748
EKY26991.1
Stage III sporulation protein AC; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.721
EKY22730.1
Sporulation protein YqfD; Psort location: Cytoplasmic, score: 7.50.
  
     0.717
EKY27635.1
Spore coat protein, CotS family; KEGG: tan:TA14410 3.8e-07 choline/ethanolamine kinase K00866; Psort location: Cytoplasmic, score: 7.50.
 
     0.705
EKY25090.1
Small, acid-soluble spore protein C2; Psort location: Cytoplasmic, score: 9.64.
  
     0.705
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.