Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKY27671.1Peptidase, M23 family; KEGG: npu:Npun_F4637 7.1e-12 peptidase M23B. (277 aa)    
Predicted Functional Partners:
EKY28610.1
Peptidase, M23 family; KEGG: lsg:lse_2404 3.0e-40 peptidase family protein; Psort location: Extracellular, score: 9.70.
 
    0.748
EKY27670.1
Stage II sporulation protein D; Psort location: Cellwall, score: 8.76.
 
   
 0.681
EKY27672.1
Sporulation transcriptional regulator SpoIIID; Psort location: Cytoplasmic, score: 7.50.
  
    0.635
EKY27673.1
Mbl protein; KEGG: apb:SAR116_0710 4.4e-87 cell shape determining protein MreB/Mrl K03569; Psort location: Cytoplasmic, score: 9.97.
       0.524
murA-2
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.467
EKY27668.1
Hypothetical protein; KEGG: rbe:RBE_0092 0.0023 atpH; F0F1 ATP synthase subunit delta K02113.
       0.410
atpC
ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
       0.400
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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