STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY27509.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (248 aa)    
Predicted Functional Partners:
EKY27510.1
VTC domain protein.
 
    0.975
EKY27508.1
CotH protein; Psort location: CytoplasmicMembrane, score: 9.87.
 
     0.942
EKY23294.1
VTC domain protein; Psort location: Cytoplasmic, score: 7.50.
 
    0.815
EKY25199.1
CotH protein.
 
     0.799
EKY27511.1
KEGG: rha:RHA1_ro05622 2.1e-41 response regulator (protein-glutamate methylesterase) K07669; Psort location: Cytoplasmic, score: 9.97.
  
   0.569
EKY27512.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bpb:bpr_I0044 3.1e-51 two component system histidine kinase; Psort location: CytoplasmicMembrane, score: 9.99.
  
    0.531
EKY23295.1
Hypothetical protein; KEGG: eci:UTI89_C1627 1.4e-19 entS; EntS/YbdA MFS transporter.
 
     0.459
EKY27072.1
Dockerin type I repeat-containing domain protein; KEGG: cpf:CPF_1474 0.0018 lacZ; beta-galactosidase K01190.
 
     0.453
atpB
ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
    
 
 0.431
EKY23487.1
Hypothetical protein; KEGG: zin:ZICARI_164 0.00048 sucB; putative 2-oxoglutarate dehydrogenase, E2 subunit; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase).
  
     0.402
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.