Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY27516.1KEGG: cpf:CPF_0460 9.5e-156 sensor histidine kinase K00936; Psort location: CytoplasmicMembrane, score: 9.99. (742 aa)    
Predicted Functional Partners:
EKY27515.1
KEGG: bde:BDP_0386 1.3e-39 vicR; response regulator protein VicR K07776; Psort location: Cytoplasmic, score: 9.97.
 
 0.962
EKY24400.1
Response regulator receiver domain protein; KEGG: fal:FRAAL1628 2.7e-39 response regulator in two-component regulatory system K05971; Psort location: Cytoplasmic, score: 9.97.
 
 0.832
EKY27374.1
Diguanylate cyclase domain protein.
  
 0.814
EKY27433.1
PAS domain S-box protein; KEGG: cbe:Cbei_4925 2.7e-55 PAS/PAC sensor signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.51.
  
  
 0.613
EKY27891.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cbe:Cbei_4925 2.6e-57 PAS/PAC sensor signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 8.78.
 
0.590
EKY27511.1
KEGG: rha:RHA1_ro05622 2.1e-41 response regulator (protein-glutamate methylesterase) K07669; Psort location: Cytoplasmic, score: 9.97.
 
  0.585
EKY29808.1
Putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP; KEGG: pme:NATL1_11471 9.4e-46 phoB; two-component response regulator, phosphate K07657; Psort location: Cytoplasmic, score: 9.97.
 
 0.568
EKY28846.1
KEGG: bde:BDP_0386 3.3e-34 vicR; response regulator protein VicR K07776; Psort location: Cytoplasmic, score: 9.97.
  
  0.538
EKY29643.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: amt:Amet_1278 2.1e-41 integral membrane sensor signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 8.78.
  
 0.530
EKY23560.1
Putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP; KEGG: npu:Npun_F4214 2.0e-36 two component transcriptional regulator K07657; Psort location: Cytoplasmic, score: 9.97.
  
 0.511
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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