STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY27521.1Cupin domain protein; KEGG: cco:CCC13826_0495 0.00085 5'-nucleotidase SurE; Psort location: Cytoplasmic, score: 7.50. (107 aa)    
Predicted Functional Partners:
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.711
EKY24865.1
KEGG: bcz:BCZK3497 6.1e-19 adaA; AraC family transcriptional regulator K13530; Psort location: Cytoplasmic, score: 9.67.
  
 0.657
EKY23488.1
KEGG: bwe:BcerKBAB4_3508 3.0e-10 AraC family transcriptional regulator; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase.
  
 0.657
EKY22929.1
AraC-like ligand binding domain protein; KEGG: cbk:CLL_A0691 0.00021 transcriptional regulator, AraC family.
  
 0.657
EKY26286.1
Cupin domain protein; KEGG: apb:SAR116_1185 1.2e-13 probable transcriptional regulator; Psort location: Cytoplasmic, score: 7.50.
  
 0.583
EKY27518.1
Hydrid cluster protein-associated redox disulfide domain protein; KEGG: cpy:Cphy_2846 2.6e-14 hydroxylamine reductase; K00378 hydroxylamine reductase; Psort location: Cytoplasmic, score: 7.50.
       0.580
hcp-2
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
       0.575
EKY27519.1
Hypothetical protein.
       0.566
EKY26428.1
Chorismate mutase; KEGG: cbe:Cbei_4573 1.1e-122 chorismate mutase; K04093 chorismate mutase K04518; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.540
sigA
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
    
 
 0.496
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.