STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY27537.1Hypothetical protein; KEGG: yen:YE2520 1.3e-25 fliB; flagellin lysine-N-methylase K00599; Psort location: Cytoplasmic, score: 7.50. (414 aa)    
Predicted Functional Partners:
EKY27536.1
Hypothetical protein; KEGG: edi:EDI_249400 0.0024 cytoskeletal protein Sojo; Psort location: CytoplasmicMembrane, score: 9.35.
       0.752
EKY25793.1
Acetyltransferase, GNAT family.
  
     0.604
EKY23485.1
Pentapeptide repeat protein; KEGG: btk:BT9727_2180 9.2e-05 acetyltransferase K00680; Psort location: Cytoplasmic, score: 7.50.
  
    0.489
EKY27437.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.401
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.