close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY27545.13-octaprenyl-4-hydroxybenzoate carboxy-lyase; KEGG: enc:ECL_01944 1.9e-157 3,4-dihydroxybenzoate decarboxylase; K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD; Psort location: Cytoplasmic, score: 7.50; Belongs to the UbiD family. (493 aa)    
Predicted Functional Partners:
ubiX
Polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
 
 
 0.978
EKY22757.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.940
EKY23254.1
KEGG: toc:Toce_1348 5.4e-82 4-hydroxybenzoate polyprenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the UbiA prenyltransferase family.
 
  
 0.892
EKY23256.1
Hypothetical protein.
 
  
 0.794
EKY27543.1
LysR substrate binding domain protein; KEGG: apb:SAR116_1768 9.4e-05 transcriptional regulator, LysR family; Psort location: Cytoplasmic, score: 9.67.
  
   
 0.638
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.