STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY27549.1Metal cation transporter, ZIP family; KEGG: rcu:RCOM_0734880 0.0090 zinc transporter, putative; Psort location: CytoplasmicMembrane, score: 10.00. (259 aa)    
Predicted Functional Partners:
EKY27550.1
Hypothetical protein; KEGG: tjr:TherJR_2177 0.0010 diacylglycerol kinase; K00901 diacylglycerol kinase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.534
EKY27893.1
Cytochrome C biogenesis protein transmembrane region; KEGG: dat:HRM2_42210 2.8e-37 dsbD; DsbD K06196; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.433
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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