Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY27551.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (235 aa)    
Predicted Functional Partners:
EKY27037.1
PspA/IM30 family protein; KEGG: edi:EDI_048910 1.5e-08 intracellular protein transport protein USO1; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
 0.545
EKY27550.1
Hypothetical protein; KEGG: tjr:TherJR_2177 0.0010 diacylglycerol kinase; K00901 diacylglycerol kinase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.543
EKY27552.1
Putative CoA-disulfide reductase; KEGG: cdf:CD2540 1.5e-166 nox; coenzyme A disulfide reductase K00359; Psort location: Cytoplasmic, score: 9.97.
       0.441
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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