Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY27432.1Hypothetical protein; Psort location: Cytoplasmic, score: 7.50. (170 aa)    
Predicted Functional Partners:
EKY27430.1
Glutamine synthetase, beta-grasp domain protein; KEGG: cth:Cthe_0202 9.2e-158 L-glutamine synthetase K01915; Psort location: Cytoplasmic, score: 9.97.
       0.501
EKY27431.1
ANTAR domain protein; KEGG: bde:BDP_0990 6.4e-05 two-component system response regulator K07183; Psort location: CytoplasmicMembrane, score: 8.16.
       0.501
EKY27433.1
PAS domain S-box protein; KEGG: cbe:Cbei_4925 2.7e-55 PAS/PAC sensor signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 9.51.
       0.460
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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