STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY27438.1Phospholipase, patatin family; KEGG: bmd:BMD_3858 1.3e-57 patatin-like phospholipase family protein K07001. (307 aa)    
Predicted Functional Partners:
EKY23872.1
Hypothetical protein; KEGG: edi:EDI_294890 0.00029 DNA mismatch repair protein MSH2.
    
   0.554
EKY27439.1
KEGG: apb:SAR116_1094 6.4e-11 chromate transporter K07240; Psort location: CytoplasmicMembrane, score: 10.00; overlaps another CDS with the same product name.
       0.517
EKY27440.1
KEGG: apb:SAR116_1094 1.3e-22 chromate transporter K07240; Psort location: CytoplasmicMembrane, score: 10.00; overlaps another CDS with the same product name.
       0.517
EKY22234.1
AMP-binding enzyme; KEGG: ere:EUBREC_1029 2.1e-144 long-chain-fatty-acid CoA ligase; K01897 long-chain acyl-CoA synthetase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.517
EKY22041.1
Hypothetical protein; KEGG: ddi:DDB_G0281415 0.0017 hypothetical protein; K08656 dipeptidyl-peptidase 9.
    
 0.451
EKY25471.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.404
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.