STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY27442.1Hypothetical protein; KEGG: hor:Hore_22690 0.00087 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00. (270 aa)    
Predicted Functional Partners:
EKY28983.1
Hypothetical protein; KEGG: cbt:CLH_1329 4.4e-24 dolichyl-phosphate-mannose-protein mannosyltransferase; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.537
EKY27441.1
Cation efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.449
EKY27443.1
ABC transporter, solute-binding protein; KEGG: tva:TVAG_332600 0.00025 hypothetical protein; K10866 DNA repair protein RAD50.
       0.423
EKY27444.1
ABC transporter, permease protein; KEGG: ppy:PPE_00791 2.0e-27 L-arabinose transport system permease protein AraP; Psort location: CytoplasmicMembrane, score: 10.00.
       0.423
EKY25053.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
     0.402
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.