STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY27447.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (410 aa)    
Predicted Functional Partners:
EKY27446.1
Efflux transporter, RND family, MFP subunit; KEGG: edi:EDI_048910 0.00027 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 7.50.
 
     0.952
EKY27443.1
ABC transporter, solute-binding protein; KEGG: tva:TVAG_332600 0.00025 hypothetical protein; K10866 DNA repair protein RAD50.
 
     0.926
EKY27445.1
ABC transporter, permease protein; KEGG: pmo:Pmob_0956 5.6e-32 monosaccharide-transporting ATPase; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.905
EKY27444.1
ABC transporter, permease protein; KEGG: ppy:PPE_00791 2.0e-27 L-arabinose transport system permease protein AraP; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.778
EKY27022.1
Putative ATP synthase F1, epsilon subunit; KEGG: pjd:Pjdr2_0747 2.0e-79 alpha-galactosidase; Psort location: Cellwall, score: 9.26.
  
     0.550
EKY25409.1
Response regulator receiver domain protein; KEGG: npu:Npun_F1776 3.4e-16 two component LuxR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
  
     0.461
EKY29564.1
F5/8 type C domain protein; KEGG: pjd:Pjdr2_0747 3.0e-77 alpha-galactosidase; Psort location: Extracellular, score: 8.42.
  
     0.431
EKY23065.1
Hypothetical protein; KEGG: csh:Closa_3064 2.6e-11 peptidoglycan glycosyltransferase; Psort location: CytoplasmicMembrane, score: 9.87.
  
     0.414
EKY25406.1
Hypothetical protein; KEGG: tpd:Teth39_2038 4.9e-10 monosaccharide-transporting ATPase K10439; Psort location: Cytoplasmic, score: 7.50.
  
     0.404
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.