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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY27389.1Amino acid permease. (439 aa)    
Predicted Functional Partners:
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.840
EKY24021.1
Pullulanase, type I; Belongs to the glycosyl hydrolase 13 family.
  
 0.671
EKY26873.1
Alpha,alpha-phosphotrehalase; KEGG: cbk:CLL_A1820 2.0e-242 treC; alpha,alpha-phosphotrehalase K01226; Psort location: Cytoplasmic, score: 9.97.
   
 0.665
EKY26065.1
Oligo-1,6-glucosidase; KEGG: cbk:CLL_A0330 3.0e-232 glycosyl hydrolase, family 13; K01187 alpha-glucosidase; Psort location: Cytoplasmic, score: 9.97.
   
 0.665
EKY25965.1
Alpha amylase, catalytic domain protein; KEGG: bpb:bpr_I1840 4.7e-99 amy13C; alpha-amylase Amy13C; Psort location: Cytoplasmic, score: 9.67.
   
 0.665
EKY24729.1
Alpha amylase, catalytic domain protein; KEGG: cpr:CPR_0084 1.1e-188 pullulanase K01200; Psort location: Cellwall, score: 8.97; Belongs to the glycosyl hydrolase 13 family.
   
 0.665
EKY26428.1
Chorismate mutase; KEGG: cbe:Cbei_4573 1.1e-122 chorismate mutase; K04093 chorismate mutase K04518; Psort location: Cytoplasmic, score: 9.97.
   
 0.603
EKY28452.1
Hypothetical protein; KEGG: bao:BAMF_3871 7.5e-21 MAP/microtubule affinity-regulating kinase 3 RBAM_037570; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.558
EKY26344.1
Aldehyde-alcohol dehydrogenase; KEGG: cbt:CLH_1998 0. bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072; Psort location: Cytoplasmic, score: 9.97; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
 
 0.537
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
  
 
   0.506
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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