Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKY27402.1NAD/NADP octopine/nopaline dehydrogenase. (378 aa)    
Predicted Functional Partners:
der
Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
 
  
 0.628
EKY25398.1
Hypothetical protein; KEGG: clo:HMPREF0868_0202 3.2e-22 isochorismatase family protein; Psort location: Cytoplasmic, score: 7.50.
  
   0.619
EKY28458.1
Hydrogenase maturation GTPase HydF; KEGG: fta:FTA_1243 1.7e-12 trmE; tRNA modification GTPase TrmE K03650; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.573
EKY22877.1
Acetyltransferase, GNAT family; KEGG: bcz:BCZK2167 0.00022 acetyltransferase K00680; Psort location: Cytoplasmic, score: 7.50.
    
   0.533
EKY27403.1
Hypothetical protein.
       0.531
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
  
 0.523
EKY22726.1
PAP2 family protein; KEGG: cbe:Cbei_0844 6.1e-90 diacylglycerol kinase; K00901 diacylglycerol kinase; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.519
EKY24034.1
S1 RNA binding domain protein.
  
  
 0.518
EKY26446.1
FAD dependent oxidoreductase; KEGG: ctc:CTC00417 9.5e-101 oxidoreductase K00100; Psort location: Cytoplasmic, score: 7.50.
   
 
 0.504
EKY27160.1
KEGG: bmd:BMD_1283 2.4e-17 ptsH; phosphocarrier protein HPr; Psort location: Cytoplasmic, score: 10.00.
   
 
  0.499
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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