Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY27412.1Transcriptional regulator, GntR family. (478 aa)    
Predicted Functional Partners:
EKY26428.1
Chorismate mutase; KEGG: cbe:Cbei_4573 1.1e-122 chorismate mutase; K04093 chorismate mutase K04518; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.841
ddl-2
D-ala D-ala ligase protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
   
 0.806
EKY28426.1
Class II glutamine amidotransferase.
   
 
  0.795
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
    
 0.773
EKY26296.1
Putative glycerate dehydrogenase; KEGG: cbk:CLL_A0984 3.9e-111 2-hydroxyacid dehydrogenase; Psort location: Cytoplasmic, score: 9.67; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
  0.767
EKY27746.1
KEGG: cpe:CPE0150 2.1e-96 2-dehydro-3-deoxyphosphogluconate/4-hydroxy-2-ox oglutarate aldolase; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase; Psort location: Cytoplasmic, score: 9.97.
     
  0.759
EKY29328.1
Aminotransferase, class V; KEGG: cpr:CPR_0063 6.6e-148 aminotransferase, class V; K00839 aminotransferase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.686
EKY23257.1
Aminotransferase, class III; KEGG: gym:GYMC10_0624 8.6e-123 aminotransferase class-III; K07250 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.685
EKY29329.1
KEGG: cbt:CLH_3217 2.5e-109 D-3-phosphoglycerate dehydrogenase K00058; Psort location: Cytoplasmic, score: 9.97; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
  0.616
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
 
 0.600
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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