Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY27413.1MATE efflux family protein. (459 aa)    
Predicted Functional Partners:
EKY23558.1
Efflux ABC transporter, permease protein; KEGG: aap:NT05HA_0744 6.7e-09 macrolide export ATP-binding/permease protein MacB; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.528
EKY27414.1
Rhodanese-like protein; KEGG: har:HEAR2974 1.0e-09 thiosulfate sulfurtransferase K01010; Psort location: Cytoplasmic, score: 7.50.
       0.519
EKY27412.1
Transcriptional regulator, GntR family.
       0.458
ddl-2
D-ala D-ala ligase protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
       0.445
EKY27415.1
Hypothetical protein.
       0.414
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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