STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY27338.1Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein; KEGG: ctu:Ctu_37370 3.6e-11 gltP; glutamate/aspartate:proton symporter K11102; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (436 aa)    
Predicted Functional Partners:
EKY22504.1
Sodium:neurotransmitter symporter family protein; KEGG: hip:CGSHiEE_08435 9.6e-108 dihydroxy-acid dehydratase K03308; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
 
 
 0.611
EKY25757.1
AbgT transporter family protein.
  
     0.518
EKY28312.1
Cation diffusion facilitator family transporter; KEGG: mja:MJ_0449 6.5e-38 hypothetical protein; K01529; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
     
 0.471
EKY26173.1
Amino acid carrier protein.
 
  
 0.456
EKY27339.1
Hypothetical protein; Probably functions as a manganese efflux pump.
       0.431
EKY26294.1
Amino acid carrier protein; KEGG: pmj:P9211_06131 1.3e-105 Na+/alanine symporter K03310; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.413
EKY27337.1
KEGG: cbt:CLH_3339 4.1e-148 putative ATP-dependent RNA helicase RhlE K11927; Psort location: Cytoplasmic, score: 9.97; Belongs to the DEAD box helicase family.
  
    0.409
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.