STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY27244.1Putative ATP synthase F1, epsilon subunit; KEGG: cbe:Cbei_0087 1.8e-67 prsA; peptidylprolyl isomerase K07533; Psort location: CytoplasmicMembrane, score: 8.78. (337 aa)    
Predicted Functional Partners:
pth
aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
       0.614
mfd
Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.
       0.606
EKY27243.1
Stage V sporulation protein T; Psort location: Cytoplasmic, score: 9.97.
       0.572
EKY27246.1
Hypothetical protein; KEGG: cbe:Cbei_0086 4.5e-110 transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase); Psort location: Cytoplasmic, score: 9.97.
       0.542
EKY29791.1
Putative peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.530
EKY22488.1
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.530
EKY27237.1
Spore cortex biosynthesis protein YabQ; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.501
EKY27242.1
Putative stage V sporulation protein B; KEGG: fno:Fnod_1668 0.0011 monosaccharide-transporting ATPase K10547; Psort location: CytoplasmicMembrane, score: 10.00.
       0.497
EKY27241.1
MazG family protein; KEGG: bmd:BMD_0076 1.2e-102 tetrapyrrole methylase family protein / MazG family protein K02499; Psort location: Cytoplasmic, score: 7.50.
       0.489
EKY23482.1
Tetratricopeptide repeat protein; KEGG: ava:Ava_1552 5.1e-10 TPR repeat-containing serine/threonin protein kinase K00908; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.481
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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