Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EKY26966.1Pyridoxal phosphate enzyme, YggS family; KEGG: ddd:Dda3937_02601 2.1e-25 yggS; putative enzyme K06997; Psort location: Cytoplasmic, score: 7.50; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. (186 aa)    
Predicted Functional Partners:
sepF
Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
  
 0.973
EKY26970.1
DivIVA domain protein; KEGG: lwe:lwe2040 4.8e-26 cell division protein DivIVA K04074; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.919
EKY26968.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
  
  
 0.814
EKY26657.1
Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family.
  
  
 0.778
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
  
    0.765
EKY26969.1
S4 domain protein.
  
  
 0.720
EKY29331.1
MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.
      0.672
rpmC
Ribosomal protein L29; KEGG: apb:SAR116_2399 4.8e-10 ribosomal protein L29 K02904; Psort location: Cytoplasmic, score: 7.50; Belongs to the universal ribosomal protein uL29 family.
   
    0.616
rplX
Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
   
    0.602
EKY25456.1
Putative pyridoxal kinase; KEGG: cbt:CLH_2950 7.8e-90 pyridoxine kinase; K00868 pyridoxine kinase; Belongs to the pyridoxine kinase family.
  
  
 0.580
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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