Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EKY26989.1Hypothetical protein. (44 aa)    
Predicted Functional Partners:
EKY26988.1
Stage III sporulation protein AA; KEGG: rso:RSc1335 0.0072 clpB; ATP-dependent protease K03695; Psort location: Cytoplasmic, score: 7.50.
       0.773
EKY26990.1
Putative stage III sporulation protein AB; Psort location: Cytoplasmic, score: 7.50.
       0.541
EKY26991.1
Stage III sporulation protein AC; Psort location: CytoplasmicMembrane, score: 9.55.
       0.517
EKY26992.1
Stage III sporulation protein AD; Psort location: CytoplasmicMembrane, score: 10.00.
       0.510
EKY26993.1
Stage III sporulation protein AE; Psort location: CytoplasmicMembrane, score: 10.00.
       0.507
EKY26987.1
Hypothetical protein; KEGG: pmu:PM0573 0.0014 trxB; hypothetical protein; K00384 thioredoxin reductase (NADPH); Psort location: Cytoplasmic, score: 7.50.
       0.470
EKY26994.1
Putative stage III sporulation protein AF; Psort location: Cytoplasmic, score: 7.50.
       0.426
EKY26995.1
Stage III sporulation protein AG; Psort location: CytoplasmicMembrane, score: 9.87.
       0.426
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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