STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY27037.1PspA/IM30 family protein; KEGG: edi:EDI_048910 1.5e-08 intracellular protein transport protein USO1; Psort location: CytoplasmicMembrane, score: 8.78. (239 aa)    
Predicted Functional Partners:
EKY27038.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
  
 0.817
EKY27374.1
Diguanylate cyclase domain protein.
   
 
 0.578
EKY28459.1
SPFH/Band 7/PHB domain protein; KEGG: gga:427310 7.6e-07 RNF20; ring finger protein 20; K10696 E3 ubiquitin-protein ligase BRE1; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.574
EKY27036.1
4Fe-4S binding domain protein; KEGG: tte:TTE0128 6.6e-22 nuoI; formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); K00338 NADH dehydrogenase I subunit I.
       0.551
EKY27551.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.545
EKY29643.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: amt:Amet_1278 2.1e-41 integral membrane sensor signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 8.78.
    
 
 0.544
EKY27891.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: cbe:Cbei_4925 2.6e-57 PAS/PAC sensor signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 8.78.
    
 
 0.544
EKY27033.1
KEGG: tte:TTE0125 4.7e-51 nuoB; NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductase; K00331 NADH dehydrogenase I subunit B; Psort location: CytoplasmicMembrane, score: 8.78.
       0.480
EKY27034.1
Hypothetical protein; KEGG: amu:Amuc_2158 0.0019 NADH dehydrogenase (ubiquinone) 30 kDa subunit; K00332 NADH dehydrogenase I subunit C.
       0.480
EKY27035.1
Respiratory-chain NADH dehydrogenase, subunit; KEGG: cth:Cthe_3020 3.9e-134 ech hydrogenase subunit E K14090; Psort location: Cytoplasmic, score: 9.97; Belongs to the complex I 49 kDa subunit family.
       0.480
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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