STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mgsAMethylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. (163 aa)    
Predicted Functional Partners:
EKY27968.1
KEGG: cpf:CPF_0026 7.7e-99 polyA polymerase family protein; K00970 poly(A) polymerase; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.869
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
 
    0.856
EKY26917.1
Organophosphate reductase; KEGG: ccb:Clocel_1467 2.7e-103 2,5-didehydrogluconate reductase; Psort location: Cytoplasmic, score: 9.97.
     
 0.834
EKY26357.1
Glyoxal reductase; KEGG: cbo:CBO0984 2.7e-80 dkgA; oxidoreductase, aldo/keto reductase family; Psort location: Cytoplasmic, score: 9.97.
     
 0.834
EKY25460.1
KEGG: str:Sterm_3824 2.0e-132 iron-containing alcohol dehydrogenase; K00100; Psort location: Cytoplasmic, score: 9.67.
  
 
 0.832
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
     
 0.826
ldh-2
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
     
 0.826
EKY28426.1
Class II glutamine amidotransferase.
    
  0.815
EKY28464.1
Biotin protein ligase domain protein; KEGG: cpf:CPF_0664 4.0e-31 birA; BirA bifunctional protein K03524.
 
  
 0.712
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
  
    0.699
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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