STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY27053.1Hypothetical protein; KEGG: ehi:EHI_079960 3.3e-06 102.t00005; hypothetical protein; K10866 DNA repair protein RAD50. (257 aa)    
Predicted Functional Partners:
EKY27052.1
KEGG: sds:SDEG_0016 1.7e-16 amino acid permease K03294; Psort location: CytoplasmicMembrane, score: 10.00.
       0.458
EKY27054.1
Oxidoreductase NAD-binding domain protein; KEGG: aar:Acear_0062 3.3e-17 sulfide dehydrogenase (flavoprotein) subunit SudB K00528; Psort location: Cytoplasmic, score: 9.97.
       0.452
EKY27055.1
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; KEGG: kol:Kole_0031 3.6e-06 tRNA (uracil-5-)-methyltransferase Gid K04094; Psort location: Cytoplasmic, score: 7.50.
       0.452
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.