Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY26914.1Transporter, major facilitator family protein; KEGG: ccv:CCV52592_1794 5.6e-08 Xaa-Pro dipeptidase K08223; Psort location: CytoplasmicMembrane, score: 10.00. (444 aa)    
Predicted Functional Partners:
EKY26428.1
Chorismate mutase; KEGG: cbe:Cbei_4573 1.1e-122 chorismate mutase; K04093 chorismate mutase K04518; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.781
EKY26110.1
KEGG: cbk:CLL_A2853 3.0e-271 5-methyltetrahydrofolate--homocysteine methyltransferase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase; Psort location: Cytoplasmic, score: 7.50.
   
 
  0.775
EKY25756.1
[2Fe-2S]-binding domain protein.
  
  
 0.716
EKY23897.1
Bacteriophage Gp15 protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.552
EKY26913.1
Transporter, major facilitator family protein; KEGG: bmd:BMD_0780 8.9e-12 narK; nitrite extrusion protein K02575; Psort location: CytoplasmicMembrane, score: 10.00.
 
    
0.520
EKY26912.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.489
EKY23894.1
Hypothetical protein.
  
     0.474
EKY28342.1
Hypothetical protein.
  
     0.449
EKY28343.1
Hypothetical protein.
  
     0.435
EKY27532.1
PTS system fructose-specific EIIABC component; KEGG: cbe:Cbei_1844 2.2e-234 PTS system, fructose subfamily, IIC subunit; K02768 PTS system, fructose-specific IIA component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00.
    
 
 0.430
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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