STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY26918.1Transcriptional regulator, MerR family; KEGG: vfi:VF_A0114 0.0036 methyltransferase K00599. (133 aa)    
Predicted Functional Partners:
EKY28426.1
Class II glutamine amidotransferase.
     
 0.845
EKY23398.1
Hypothetical protein; KEGG: ptm:GSPATT00035518001 0.0016 hypothetical protein; K01514 exopolyphosphatase; Psort location: Cytoplasmic, score: 7.50.
  
     0.765
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
  0.761
EKY27374.1
Diguanylate cyclase domain protein.
    
 0.719
EKY23319.1
KEGG: ebr:ECB_01448 7.3e-25 yddV; predicted diguanylate cyclase; K13069 diguanylate cyclase; Psort location: CytoplasmicMembrane, score: 8.78.
    
 0.599
EKY26916.1
Hypothetical protein; KEGG: ssa:SSA_0421 4.4e-09 phosphoglycerate mutase family protein, putative; Belongs to the phosphoglycerate mutase family.
 
     0.554
EKY26917.1
Organophosphate reductase; KEGG: ccb:Clocel_1467 2.7e-103 2,5-didehydrogluconate reductase; Psort location: Cytoplasmic, score: 9.97.
       0.549
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.535
EKY26915.1
Hypothetical protein; KEGG: lwe:lwe1260 1.1e-17 phosphoglycerate mutase family protein; Psort location: Cytoplasmic, score: 7.50.
       0.493
EKY26919.1
TIGR02206 family protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.475
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.