STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY26891.1YqeY-like protein; KEGG: mea:Mex_1p0439 5.8e-14 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) K09117; Psort location: Cytoplasmic, score: 7.50. (145 aa)    
Predicted Functional Partners:
rpsU
Ribosomal protein S21; KEGG: sew:SeSA_A3399 6.0e-12 rpsU; 30S ribosomal protein S21 K02970; Psort location: Cytoplasmic, score: 9.97; Belongs to the bacterial ribosomal protein bS21 family.
  
  
 0.935
rpsO
Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
   
    0.582
EKY26892.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.55.
       0.514
EKY26890.1
Hypothetical protein; KEGG: pyo:PY02226 0.0033 dihydropteroate synthase; K00796 dihydropteroate synthase K00950; Psort location: Cytoplasmic, score: 7.50.
       0.465
EKY26137.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
       0.460
rpmE
Ribosomal protein L31; Binds the 23S rRNA.
   
    0.448
hrcA
Transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.
 
     0.421
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.