STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKY26564.1HNH endonuclease domain protein; Psort location: Cytoplasmic, score: 7.50. (163 aa)    
Predicted Functional Partners:
EKY26110.1
KEGG: cbk:CLL_A2853 3.0e-271 5-methyltetrahydrofolate--homocysteine methyltransferase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase; Psort location: Cytoplasmic, score: 7.50.
    
  0.812
EKY26565.1
Hypothetical protein.
       0.773
EKY23872.1
Hypothetical protein; KEGG: edi:EDI_294890 0.00029 DNA mismatch repair protein MSH2.
   
 
 0.698
EKY26562.1
Putative phage terminase, large subunit; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.670
EKY26563.1
KEGG: bao:BAMF_0845 0.00016 p27; P27 family phage terminase small subunit.
  
    0.642
EKY26560.1
Phage portal protein.
  
  
 0.551
EKY28086.1
Phage terminase, small subunit, P27 family.
  
    0.537
EKY28085.1
Putative phage terminase, large subunit.
  
  
 0.450
EKY26558.1
Phage prohead protease, HK97 family; Psort location: Cytoplasmic, score: 7.50.
       0.439
EKY26559.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
       0.424
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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