Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EKY26617.1Sporulation integral membrane protein YlbJ; Psort location: CytoplasmicMembrane, score: 10.00. (343 aa)    
Predicted Functional Partners:
EKY22731.1
Sporulation protein YqfC; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.833
EKY26645.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.823
EKY22730.1
Sporulation protein YqfD; Psort location: Cytoplasmic, score: 7.50.
 
   
 0.809
EKY26992.1
Stage III sporulation protein AD; Psort location: CytoplasmicMembrane, score: 10.00.
  
   
 0.781
EKY27642.1
Stage II sporulation protein R; Psort location: Cytoplasmic, score: 7.50.
  
   
 0.777
EKY27672.1
Sporulation transcriptional regulator SpoIIID; Psort location: Cytoplasmic, score: 7.50.
  
  
 0.776
EKY26988.1
Stage III sporulation protein AA; KEGG: rso:RSc1335 0.0072 clpB; ATP-dependent protease K03695; Psort location: Cytoplasmic, score: 7.50.
  
   
 0.771
gpr
GPR endopeptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
     0.771
EKY22769.1
KEGG: bao:BAMF_1841 2.1e-71 spoVAD1; stage V sporulation protein AD.
  
     0.766
EKY27243.1
Stage V sporulation protein T; Psort location: Cytoplasmic, score: 9.97.
  
   
 0.765
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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