Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EKY26618.1Hypothetical protein; KEGG: apo:Arcpr_1638 2.8e-07 ATP synthase H subunit; K02121 V-type H+-transporting ATPase subunit E; Psort location: Cytoplasmic, score: 7.50. (178 aa)    
Predicted Functional Partners:
EKY26620.1
KEGG: cbt:CLH_1180 5.3e-75 rsmD; RNA methyltransferase, RsmD family; Psort location: Cytoplasmic, score: 7.50.
  
    0.834
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.750
EKY22275.1
Rod shape-determining protein MreD; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.573
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
       0.569
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
     
  0.567
EKY22510.1
six-Cys-in-45 modification radical SAM protein; KEGG: pmz:HMPREF0659_A5139 3.3e-09 anaerobic sulfatase maturase K06871; Psort location: Cytoplasmic, score: 7.50.
  
     0.558
EKY26624.1
Hypothetical protein.
 
     0.547
EKY26623.1
DAK2 domain fusion protein YloV.
 
     0.525
EKY27869.1
DNA replication protein DnaC; KEGG: apb:SAR116_1558 0.0015 ATPase K02313; Psort location: Cytoplasmic, score: 9.97.
  
     0.480
EKY25124.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.470
Your Current Organism:
Clostridium celatum
NCBI taxonomy Id: 545697
Other names: C. celatum DSM 1785, Clostridium celatum DSM 1785
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